Tootfinder

Koza and Koza-Hub for born-interoperable knowledge graph generation using KGX
Daniel R Korn, Patrick Golden, Aaron Odell, Katherina Cortes, Shilpa Sundar, Kevin Schaper, Sarah Gehrke, Corey Cox, Harry Caufield, Justin Reese, Evan Morris, Christopher J Mungall, Melissa Haendel
https://arxiv.org/abs/2509.09096

Koza and Koza-Hub for born-interoperable knowledge graph generation using KGX
Knowledge graph construction has become an essential domain for the future of biomedical research. But current approaches demand a high amount of redundant labor. These redundancies are the result of the lack of data standards and "knowledge-graph ready" data from sources. Using the KGX standard, we aim to solve these issues. Herein we introduce Koza and the Koza-Hub, a Python software package which streamlines ingesting raw biomedical information into the KGX format, and an associated set of c…