Tootfinder

SiliCoN: Simultaneous Nuclei Segmentation and Color Normalization of Histological Images
Suman Mahapatra, Pradipta Maji
https://arxiv.org/abs/2506.07028 ht…

SiliCoN: Simultaneous Nuclei Segmentation and Color Normalization of Histological Images
Segmentation of nuclei regions from histological images is an important task for automated computer-aided analysis of histological images, particularly in the presence of impermissible color variation in the color appearance of stained tissue images. While color normalization enables better nuclei segmentation, accurate segmentation of nuclei structures makes color normalization rather trivial. In this respect, the paper proposes a novel deep generative model for simultaneously segmenting nucle…

The ALMA Survey of Gas Evolution of PROtoplanetary Disks (AGE-PRO): XI. Beam-corrected gas disk sizes from fitting 12CO moment zero maps
Leon Trapman, Miguel Vioque, Nicol\'as T. Kurtovic, Ke Zhang, Giovanni P. Rosotti, Paola Pinilla, John Carpenter, Lucas A. Cieza, Ilaria Pascucci, Rossella Anania, Carolina Agurto-Gangas, Dingshan Deng, James Miley, Laura M. P\'erez, Anibal Sierra, Beno\^it Tabone, Dary A. Ru\'iz-Rodr\'iguez, Camilo Gonz\'alez-Ruilova, Estephani To…

The ALMA Survey of Gas Evolution of PROtoplanetary Disks (AGE-PRO): XI. Beam-corrected gas disk sizes from fitting 12CO moment zero maps
The inward drift of mm-cm sized pebbles in protoplanetary disks has become an important part of our current theories of planet formation and, more recently, planet composition as well. The gas-to-dust size ratio of protoplanetary disks can provide an important constraint on how pebbles have drifted inward provided that observational effects, especially resolution, can be accounted for. Here we present a method for fitting beam-convolved models to integrated intensity maps of line emission using…

Optimal Transport Driven Asymmetric Image-to-Image Translation for Nuclei Segmentation of Histological Images
Suman Mahapatra, Pradipta Maji
https://arxiv.org/abs/2506.07023

Optimal Transport Driven Asymmetric Image-to-Image Translation for Nuclei Segmentation of Histological Images
Segmentation of nuclei regions from histological images enables morphometric analysis of nuclei structures, which in turn helps in the detection and diagnosis of diseases under consideration. To develop a nuclei segmentation algorithm, applicable to different types of target domain representations, image-to-image translation networks can be considered as they are invariant to target domain image representations. One of the important issues with image-to-image translation models is that they fai…

The ALMA Survey of Gas Evolution of PROtoplanetary Disks (AGE-PRO): VII. Testing accretion mechanisms from disk population synthesis
Beno\^it Tabone, Giovanni P. Rosotti, Leon Trapman, Paola Pinilla, Ilaria Pascucci, Alice Somigliana, Richard Alexander, Miguel Vioque, Rossella Anania, Aleksandra Kuznetsova, Ke Zhang, Laura M. P\'erez, Lucas A. Cieza, John Carpenter, Dingshan Deng, Carolina Agurto-Gangas, Dary A. Ru\'iz-Rodr\'iguez, Anibal Sierra, Nicol\'as T. Kurtovic, …

The ALMA Survey of Gas Evolution of PROtoplanetary Disks (AGE-PRO): VII. Testing accretion mechanisms from disk population synthesis
The architecture of planetary systems depends on the evolution of the disks in which they form. In this work, we develop a population synthesis approach to interpret the AGE-PRO measurements of disk gas mass and size considering two scenarios: turbulence-driven evolution with photoevaporative winds and MHD disk-wind-driven evolution. A systematic method is proposed to constrain the distribution of disk parameters from the disk fractions, accretion rates, disk gas masses, and CO gas sizes. We fi…

The ALMA Survey of Gas Evolution of PROtoplanetary Disks (AGE-PRO): III. Dust and Gas Disk Properties in the Lupus Star-forming Region
Dingshan Deng, Miguel Vioque, Ilaria Pascucci, Laura M. P\'erez, Ke Zhang, Nicol\'as T. Kurtovic, Leon Trapman, Estephani E. TorresVillanueva, Carolina Agurto-Gangas, John Carpenter, Paola Pinilla, Uma Gorti, Beno\^it Tabone, Anibal Sierra, Giovanni P. Rosotti, Lucas A. Cieza, Rossella Anania, Camilo Gonz\'alez-Ruilova, Michiel R. Hogerheijd…

The ALMA Survey of Gas Evolution of PROtoplanetary Disks (AGE-PRO): III. Dust and Gas Disk Properties in the Lupus Star-forming Region
We present Band 6 and Band 7 observations of 10 Lupus disks around M3-K6 stars from the ALMA survey of Gas Evolution in PROtoplanetary disks (AGE-PRO) Large Program. In addition to continuum emission in both bands, our Band 6 setup covers the $\mathrm{{}^{12}CO}$, $\mathrm{{}^{13}CO}$ and $\mathrm{C^{18}O}\,J$=2-1 lines, while our Band 7 setup covers the $\mathrm{N_2H^+}\,J$=3-2 line. All of our sources are detected in $\mathrm{{}^{12}CO}$ and $\mathrm{{}^{13}CO}$, 7 out of 10 are detected in $…

The ALMA Survey of Gas Evolution of PROtoplanetary Disks (AGE-PRO): IV. Dust and Gas Disk Properties in the Upper Scorpius Star-forming Region
Carolina Agurto-Gangas, L. M. P\'erez, Anibal Sierra, James Miley, Ke Zhang, Ilaria Pascucci, Paola Pinilla, Dingshan Deng, John Carpenter, Leon Trapman, Miguel Vioque, Giovanni P. Rosotti, Nicol\'as Kurtovic, Lucas A. Cieza, Kamber Schwarz, Michiel R. Hogerheijde, Rossella Anania, Beno\^it Tabone, Estephani E. Torres-Villanueva, Dary A.…

The ALMA Survey of Gas Evolution of PROtoplanetary Disks (AGE-PRO): IV. Dust and Gas Disk Properties in the Upper Scorpius Star-forming Region
The Atacama Large Millimeter/submillimeter Array (ALMA) large program AGE-PRO explores protoplanetary disk evolution by studying gas and dust across various ages. This work focuses on ten evolved disks in Upper Scorpius, observed in dust continuum emission, CO and its isotopologues, and N$_2$H$^+$ with ALMA Bands 6 and 7. Disk radii, from the radial location enclosing 68% of the flux, are comparable to those in the younger Lupus region for both gas and dust tracers. However, solid masses are ab…

exoALMA. XVIII. Interpreting large scale kinematic structures as moderate warping
Andrew J. Winter, Myriam Benisty, Andr\'es F. Izquierdo, Giuseppe Lodato, Richard Teague, Carolin N. Kimmig, Sean M. Andrews, Jaehan Bae, Marcelo Barraza-Alfaro, Nicol\'as Cuello, Pietro Curone, Ian Czekala, Stefano Facchini, Daniele Fasano, Cassandra Hall, Caitlyn Hardiman, Thomas Hilder, John D. Ilee, Misato Fukagawa, Cristiano Longarini, Fran\c{c}ois M\'enard, Ryuta Orihara, Christophe Pint…

exoALMA. XVIII. Interpreting large scale kinematic structures as moderate warping
The exoALMA program gave an unprecedented view of the complex kinematics of protoplanetary disks, revealing diverse structures that remain poorly understood. We show that moderate disk warps ($\sim 0.5-2^\circ$) can naturally explain many of the observed large-scale velocity features with azimuthal wavenumber $m = 1$. Using a simple model, we interpret line-of-sight velocity variations as changes in the projected Keplerian rotation caused by warping of the disk. While not a unique explanation, …

Inner disc and circumplanetary material in the PDS 70 system
Daniele Fasano, Myriam Benisty, Pietro Curone, Stefano Facchini, Francesco Zagaria, Tomohiro C. Yoshida, Kiyoaki Doi, Anibal Sierra, Sean Andrews, Jaehan Bae, Andrea Isella, Nicol\'as T. Kurtovic, Laura M. P\'erez, Paola Pinilla, Luna Rampinelli, Richard Teague
https://

Inner disc and circumplanetary material in the PDS 70 system
The two giant protoplanets directly imaged in the dust-depleted cavity of PDS 70 offer a unique opportunity to study ongoing planet formation. Both planets have been detected in infrared thermal emission and in H$α$, indicating active accretion. We calibrate and analyse archival ALMA Band 6 and 7 observations of PDS 70 from 2019, 2021, and 2023 to search for circumplanetary material and assess its motion. Using 2D visibility modelling of the high-resolution (~0.11"x0.08" in Band 6; ~0.05"x0.05…