celegans_interactomes: C. elegans interactomes (2009)
Ten networks of protein-protein interactions in Caenorhabditis elegans (nematode), from yeast two-hybrid experiments, biological process maps, literature curation, orthologous interactions, and genetic interactions. The WI8 network combines WI2004, WI2007 and BPmaps, while the Integrated Network combines data from all sources.
This network has 2436 nodes and 136930 edges.
Tags: Biological, Protein interactions, Unweighte…
from my link log —
Interactive HTML trees with no JavaScript and no CSS.
https://shkspr.mobi/blog/2020/08/interactive-html-trees-with-no-javascript/
saved 2020-08-13
interactome_stelzl: Stelzl human interactome (2005)
A network of human proteins and their binding interactions. Nodes represent proteins and an edge represents an interaction between two proteins, as inferred via high-throughput Y2H experiments using bait and prey methodology.
This network has 1706 nodes and 6207 edges.
Tags: Biological, Protein interactions, Unweighted
interactome_vidal: Vidal human interactome (2005)
A network of human proteins and their binding interactions. Nodes represent proteins and an edge represents a binding interaction between two proteins, as tested using a high-throughput yeast two-hybrid (Y2H) system.
This network has 3133 nodes and 6726 edges.
Tags: Biological, Protein interactions, Unweighted
genetic_multiplex: Multiplex genetic interactions (2014)
Multiplex networks representing different types of genetic interactions, for different organisms. Layers represent (i) physical, (ii) association, (iii) co-localization, (iv) direct, and (v) suppressive, (vi) additive or synthetic genetic interaction. Edge direction (i,j) indicates gene i interacting with gene j.
This network has 3879 nodes and 8182 edges.
Tags: Biological, Gene regulation, Protein interactions, Unwei…
genetic_multiplex: Multiplex genetic interactions (2014)
Multiplex networks representing different types of genetic interactions, for different organisms. Layers represent (i) physical, (ii) association, (iii) co-localization, (iv) direct, and (v) suppressive, (vi) additive or synthetic genetic interaction. Edge direction (i,j) indicates gene i interacting with gene j.
This network has 6570 nodes and 282755 edges.
Tags: Biological, Gene regulation, Protein interactions, Unw…
interactome_stelzl: Stelzl human interactome (2005)
A network of human proteins and their binding interactions. Nodes represent proteins and an edge represents an interaction between two proteins, as inferred via high-throughput Y2H experiments using bait and prey methodology.
This network has 1706 nodes and 6207 edges.
Tags: Biological, Protein interactions, Unweighted
tree-of-life: Protein interactomes across the tree of life (2019)
Protein-protein iteraction networks ("interactome") for 1,840 species. An interactome captures all physical protein-protein interactions within one species, from direct biophysical protein-protein interactions to regulatory protein-DNA and metabolic interactions. .
This network has 320 nodes and 387 edges.
Tags: Biological, Protein interactions