interactome_stelzl: Stelzl human interactome (2005)
A network of human proteins and their binding interactions. Nodes represent proteins and an edge represents an interaction between two proteins, as inferred via high-throughput Y2H experiments using bait and prey methodology.
This network has 1706 nodes and 6207 edges.
Tags: Biological, Protein interactions, Unweighted
from my link log —
Interactive HTML trees with no JavaScript and no CSS.
https://shkspr.mobi/blog/2020/08/interactive-html-trees-with-no-javascript/
saved 2020-08-13
«Internet-Blockaden in Russland — Ein Eiserner Vorhang - dieses Mal digital:
Die Abtrennung Russlands vom globalen Internet scheint im vollen Gange zu sein. Russland schränkt den Zugang immer weiter ein und sperrt auch immer mehr VPNs. So entsteht ein digitaler Eiserner Vorhang zum Ausland»
Nun ja, VPN ist noch lange nicht @…,
interactome_pdz: PDZ-domain interactome (2005)
A network of PDZ-domain-mediated protein–protein binding interactions, extracted from the PDZBase database. Nodes represent proteins and an edge represents a binding interaction between two proteins.
This network has 212 nodes and 244 edges.
Tags: Biological, Protein interactions, Unweighted
genetic_multiplex: Multiplex genetic interactions (2014)
Multiplex networks representing different types of genetic interactions, for different organisms. Layers represent (i) physical, (ii) association, (iii) co-localization, (iv) direct, and (v) suppressive, (vi) additive or synthetic genetic interaction. Edge direction (i,j) indicates gene i interacting with gene j.
This network has 3879 nodes and 8182 edges.
Tags: Biological, Gene regulation, Protein interactions, Unwei…
genetic_multiplex: Multiplex genetic interactions (2014)
Multiplex networks representing different types of genetic interactions, for different organisms. Layers represent (i) physical, (ii) association, (iii) co-localization, (iv) direct, and (v) suppressive, (vi) additive or synthetic genetic interaction. Edge direction (i,j) indicates gene i interacting with gene j.
This network has 6570 nodes and 282755 edges.
Tags: Biological, Gene regulation, Protein interactions, Unw…
tree-of-life: Protein interactomes across the tree of life (2019)
Protein-protein iteraction networks ("interactome") for 1,840 species. An interactome captures all physical protein-protein interactions within one species, from direct biophysical protein-protein interactions to regulatory protein-DNA and metabolic interactions. .
This network has 320 nodes and 387 edges.
Tags: Biological, Protein interactions
blumenau_drug: Blumenau drug interactions (2019)
A network of drug-drug interactions, extracted from 18 months of electronic health records (EHRs) from the city of Blumenau in Southern Brazil. Nodes are annotated with drug information (separate file), and edges are weighted by the severity of the interaction, along with other information.
This network has 75 nodes and 181 edges.
Tags: Biological, Drug interactions, Weighted, Metadata