celegans_interactomes: C. elegans interactomes (2009)
Ten networks of protein-protein interactions in Caenorhabditis elegans (nematode), from yeast two-hybrid experiments, biological process maps, literature curation, orthologous interactions, and genetic interactions. The WI8 network combines WI2004, WI2007 and BPmaps, while the Integrated Network combines data from all sources.
This network has 2436 nodes and 136930 edges.
Tags: Biological, Protein interactions, Unweighte…
from my link log —
Interactive HTML trees with no JavaScript and no CSS.
https://shkspr.mobi/blog/2020/08/interactive-html-trees-with-no-javascript/
saved 2020-08-13
Pushing back on AI job loss fears, AWS CEO Matt Garman says Amazon plans to hire 11,000 software engineering interns in 2026, a figure in line with recent years (Ben Shimkus/Business Insider)
https://www.businessinsider.com/aws-ceo-amazon-ai-coding-jobs-in…
interactome_vidal: Vidal human interactome (2005)
A network of human proteins and their binding interactions. Nodes represent proteins and an edge represents a binding interaction between two proteins, as tested using a high-throughput yeast two-hybrid (Y2H) system.
This network has 3133 nodes and 6726 edges.
Tags: Biological, Protein interactions, Unweighted
internet_as: Internet AS graph (2006)
A symmetrized snapshot of the structure of the Internet at the level of Autonomous Systems (ASs), reconstructed from BGP tables posted by the University of Oregon Route Views Project. This snapshot was created on 22 July 2006.
This network has 22963 nodes and 48436 edges.
Tags: Technological, Communication, Unweighted
genetic_multiplex: Multiplex genetic interactions (2014)
Multiplex networks representing different types of genetic interactions, for different organisms. Layers represent (i) physical, (ii) association, (iii) co-localization, (iv) direct, and (v) suppressive, (vi) additive or synthetic genetic interaction. Edge direction (i,j) indicates gene i interacting with gene j.
This network has 3879 nodes and 8182 edges.
Tags: Biological, Gene regulation, Protein interactions, Unwei…
interactome_stelzl: Stelzl human interactome (2005)
A network of human proteins and their binding interactions. Nodes represent proteins and an edge represents an interaction between two proteins, as inferred via high-throughput Y2H experiments using bait and prey methodology.
This network has 1706 nodes and 6207 edges.
Tags: Biological, Protein interactions, Unweighted
tree-of-life: Protein interactomes across the tree of life (2019)
Protein-protein iteraction networks ("interactome") for 1,840 species. An interactome captures all physical protein-protein interactions within one species, from direct biophysical protein-protein interactions to regulatory protein-DNA and metabolic interactions. .
This network has 320 nodes and 387 edges.
Tags: Biological, Protein interactions
blumenau_drug: Blumenau drug interactions (2019)
A network of drug-drug interactions, extracted from 18 months of electronic health records (EHRs) from the city of Blumenau in Southern Brazil. Nodes are annotated with drug information (separate file), and edges are weighted by the severity of the interaction, along with other information.
This network has 75 nodes and 181 edges.
Tags: Biological, Drug interactions, Weighted, Metadata