celegans_interactomes: C. elegans interactomes (2009)
Ten networks of protein-protein interactions in Caenorhabditis elegans (nematode), from yeast two-hybrid experiments, biological process maps, literature curation, orthologous interactions, and genetic interactions. The WI8 network combines WI2004, WI2007 and BPmaps, while the Integrated Network combines data from all sources.
This network has 2528 nodes and 3864 edges.
Tags: Biological, Protein interactions, Unweighted
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interactome_yeast: Coulomb yeast interactome (2005)
A network of protein-protein binding interactions among yeast proteins. Nodes represent proteins found in yeast (Saccharomyces cerevisiae) and an edge represents a binding interaction between two proteins.
This network has 1870 nodes and 2277 edges.
Tags: Biological, Protein interactions, Unweighted
interactome_vidal: Vidal human interactome (2005)
A network of human proteins and their binding interactions. Nodes represent proteins and an edge represents a binding interaction between two proteins, as tested using a high-throughput yeast two-hybrid (Y2H) system.
This network has 3133 nodes and 6726 edges.
Tags: Biological, Protein interactions, Unweighted
dom: Animal dominance archive (2022)
Animal dominance interaction data published over a century of research. The archive contains 434 agonistic interaction datasets, totaling over 241,000 interactions. A directed edge (i,j) corresponds to an antagonist interaction between i (winner) and j (loser). If a 'weight' edge property map exists, it counts the number of such interactions.
This network has 7 nodes and 10 edges.
Tags: Social, Animal, Weighted
genetic_multiplex: Multiplex genetic interactions (2014)
Multiplex networks representing different types of genetic interactions, for different organisms. Layers represent (i) physical, (ii) association, (iii) co-localization, (iv) direct, and (v) suppressive, (vi) additive or synthetic genetic interaction. Edge direction (i,j) indicates gene i interacting with gene j.
This network has 105 nodes and 137 edges.
Tags: Biological, Gene regulation, Protein interactions, Unweigh…