
2025-09-17 12:51:11
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Controlling tissue size by active fracture
Wei Wang, Brian A. Camley
https…
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Controlling tissue size by active fracture
Wei Wang, Brian A. Camley
https…
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Overcoming classic challenges for artificial neural networks by providing incentives and practice
Kazuki Irie, Brenden M. Lake
Crosslisted article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- Deep Learning-Driven Peptide Classification in Biological Nanopores
Samuel Tovey, Julian Ho{\ss}bach, Sandro Kuppel, Tobias Ensslen, Jan C. Behrends, Christian Holm
Replaced article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Quantum Annealing for Enhanced Feature Selection in Single-Cell RNA Sequencing Data Analysis
Selim Romero, Shreyan Gupta, Victoria Gatlin, Robert S. Chapkin, James J. Cai
…
Replaced article(s) found for q-bio.GN. https://arxiv.org/list/q-bio.GN/new
[1/1]:
- Quantum Annealing for Enhanced Feature Selection in Single-Cell RNA Sequencing Data Analysis
Selim Romero, Shreyan Gupta, Victoria Gatlin, Robert S. Chapkin, James J. Cai
Replaced article(s) found for q-bio.PE. https://arxiv.org/list/q-bio.PE/new
[1/1]:
- Vendi Information Gain for Active Learning and its Application to Ecology
Quan Nguyen, Adji Bousso Dieng
Replaced article(s) found for q-bio.TO. https://arxiv.org/list/q-bio.TO/new
[1/1]:
- Controlling tissue size by active fracture
Wei Wang, Brian A. Camley
https…
Crosslisted article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- An Assembly-Line Mechanism for In-Vitro Encapsulation of Fragmented Cargo in Virus-Like Particles
Amjad, Tsvetkova, Lowry, Morgan, Zandi, van der Schoot, Dragnea
Crosslisted article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Plasticity-induced multistability on fast and slow timescales enables optimal information encodin...
Giacomo Barzon, Daniel M. Busiello, Giorgio Nicoletti
Replaced article(s) found for q-bio.CB. https://arxiv.org/list/q-bio.CB/new
[1/1]:
- Controlling tissue size by active fracture
Wei Wang, Brian A. Camley
https…
Crosslisted article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- SHREC 2025: Protein surface shape retrieval including electrostatic potential
Taher Yacoub, et al.
Crosslisted article(s) found for q-bio.OT. https://arxiv.org/list/q-bio.OT/new
[1/1]:
- Open Questions about Time and Self-reference in Living Systems
Abramsky, Banzhaf, Caves, Levin, Machado, Ofria, Stepney, White
Marco Rubio Repeatedly Put on the Spot for Trump's Failure to Secure Ukraine Cease-Fire Deal | Common Dreams
https://www.commondreams.org/news/marco-rubio-trump-russia
Crosslisted article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Unconventional Phase Separation and Fractal Interfaces of Colloids in Active Liquids
Kushwaha, Jena, Mondal, Puri, Mishra, Chikkadi
Crosslisted article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- PREDICT-GBM: Platform for Robust Evaluation and Development of Individualized Computational Tumor...
L. Zimmer, J. Weidner, M. Balcerak, F. Kofler, I. Ezhov, B. Menze, B. Wiestler
Crosslisted article(s) found for q-bio.SC. https://arxiv.org/list/q-bio.SC/new
[1/1]:
- An Assembly-Line Mechanism for In-Vitro Encapsulation of Fragmented Cargo in Virus-Like Particles
Amjad, Tsvetkova, Lowry, Morgan, Zandi, van der Schoot, Dragnea
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Effective Stimulus Propagation in Neural Circuits: Driver Node Selection
Bulat Batuev, Arsenii Onuchin, Sergey Sukhov
Crosslisted article(s) found for q-bio.GN. https://arxiv.org/list/q-bio.GN/new
[1/1]:
- Quantum-Boosted High-Fidelity Deep Learning
Wang, Chen, Xuan, Liu, Gao, Zhu, Hou, Yuan, Cheng, Yi, Wei, Ma, Xu, Wen, Li
Crosslisted article(s) found for q-bio.PE. https://arxiv.org/list/q-bio.PE/new
[1/1]:
- A Physics-Informed Neural Networks-Based Model Predictive Control Framework for $SIR$ Epidemics
Aiping Zhong, Baike She, Philip E. Par\'e
Replaced article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Controlling tissue size by active fracture
Wei Wang, Brian A. Camley
Replaced article(s) found for q-bio.MN. https://arxiv.org/list/q-bio.MN/new
[1/1]:
- Interpretable Neural ODEs for Gene Regulatory Network Discovery under Perturbations
Zaikang Lin, Sei Chang, Aaron Zweig, Minseo Kang, Elham Azizi, David A. Knowles
Crosslisted article(s) found for q-bio.CB. https://arxiv.org/list/q-bio.CB/new
[1/1]:
- Measurement of tissue viscosity to relate force and motion in collective cell migration
Molly McCord, Jacob Notbohm
Meet Camille Sturdivant: Star of Dallas Cowboys Cheerleader Netflix doc https://www.si.com/nfl/cowboys/news/camille-sturdivant-star-dallas-cowboys-cheerleader-netflix-photos-bio
Snail Homing and Mating Search Algorithm for Weight Optimization of Stepped-Transmission Shaft
Kaustav Saha, Ishaan R Kale, Vivek Patel, Anand J Kulkarni, Puskaraj D Sonawwanay
https://arxiv.org/abs/2509.13721
Crosslisted article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Sensitivity of literature $T_1$ mapping methods to the underlying magnetization transfer parameters
Jakob Assl\"ander
Replaced article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- Polymerization and replication of primordial RNA induced by clay-water interface dynamics
Carla Alejandre, Adri\'an Aguirre-Tamaral, Carlos Briones, Jacobo Aguirre
Crosslisted article(s) found for q-bio.CB. https://arxiv.org/list/q-bio.CB/new
[1/1]:
- Bioluminescence in turbulence: intermittent straining lights up dinoflagellates
Praphul Kumar, Jason R. Picardo
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- A Reanalysis of the FDA's Benefit-Risk Assessment of Moderna's mRNA-1273 COVID Vaccine: For 18-25...
Paul S. Bourdon, Ram Duriseti, H. Christian Gromoll, Dyana K. Dalton, Kevin Bardosh, Allison E…
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Intramuscular microelectrode arrays enable highly-accurate neural decoding of hand movements
Grison, Pereda, Muceli, Kundu, Baracat, Indiveri, Donati, Farina
Replaced article(s) found for q-bio.MN. https://arxiv.org/list/q-bio.MN/new
[1/1]:
- First-Passage Time Fluctuation Theorem and Thermodynamic Bound in Cooperative Biomolecular Networks
D. Evan Piephoff, Jianshu Cao
Replaced article(s) found for q-bio.OT. https://arxiv.org/list/q-bio.OT/new
[1/1]:
- NIRS: An Ontology for Non-Invasive Respiratory Support in Acute Care
Md Fantacher Islam, Jarrod Mosier, Vignesh Subbian
Crosslisted article(s) found for q-bio.CB. https://arxiv.org/list/q-bio.CB/new
[1/1]:
- Collective multicellular patterns arising from cadherin-linked cytoskeletal domains
XinXin Du, Ido Lavi, Michael J. Shelley
Crosslisted article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- Optimal message passing for molecular prediction is simple, attentive and spatial
Alma C. Castaneda-Leautaud, Rommie E. Amaro
Crosslisted article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- MIDOG 2025 Track 2: A Deep Learning Model for Classification of Atypical and Normal Mitotic Figur...
Kotte, Saipradeep, Walia, Nandagopal, Joseph, Sivadasan, Lali
Crosslisted article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Geometric Phase of Stochastic Oscillators
Yangyang Du
https://
Replaced article(s) found for q-bio.PE. https://arxiv.org/list/q-bio.PE/new
[1/1]:
- Enhancing U.S. swine farm preparedness for infectious foreign animal diseases with rapid access t...
Christian Fleming, Kelsey Mills, Nicolas Cardenas, Jason A. Galvis, Gustavo Machado
Replaced article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Cockroaches use diverse strategies to self-right on the ground
Chen Li, Toni W\"ohrl, Han K. Lam, Robert J. Full
Crosslisted article(s) found for q-bio.OT. https://arxiv.org/list/q-bio.OT/new
[1/1]:
- Neural cellular automata: applications to biology and beyond classical AI
Benedikt Hartl, Michael Levin, L\'eo Pio-Lopez
Crosslisted article(s) found for q-bio.PE. https://arxiv.org/list/q-bio.PE/new
[1/1]:
- Implications of regional variations in climate change vulnerability and mitigation behaviour for ...
Amrita Punnavajhala, Timothy M. Lenton, Chris T. Bauch, Madhur Anand
Crosslisted article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Metastable phase separation and information retrieval in multicomponent mixtures
Rodrigo Braz Teixeira, Izaak Neri, Pablo Sartori
Crosslisted article(s) found for q-bio.GN. https://arxiv.org/list/q-bio.GN/new
[1/1]:
- A Quantum Generative Framework for Modeling Single-Cell Transcriptomes with Gene-Gene and Cell-Ce...
Selim Romero, Vignesh Kumar, Robert S. Chapkin, James J. Cai
Replaced article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- AmpLyze: A Deep Learning Model for Predicting the Hemolytic Concentration
Peng Qiu, Hanqi Feng, Meng-Chun Zhang, Barnabas Poczos
Replaced article(s) found for q-bio.MN. https://arxiv.org/list/q-bio.MN/new
[1/1]:
- Reaction cleaving and complex-balanced distributions for chemical reaction networks with general ...
Linard Hoessly, Carsten Wiuf, Panqiu Xia
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Triplication: an important component of the modern scientific method
Jeremy S. C. Clark, Karina Szczypi\'or-Piasecka, Kamila Rydzewska, Konrad Podsiad{\l}o
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- When Purple Perceived Only at Fixation: A Fixation and Distance-Dependent Color Illusion
Hinnerk Schulz-Hildebrandt
Replaced article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- Beyond Ensembles: Simulating All-Atom Protein Dynamics in a Learned Latent Space
Aditya Sengar, Ali Hariri, Pierre Vandergheynst, Patrick Barth
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Algorithmic Implementation: An Introduction to a Low-Cost, GUI-Based, Semi-Unsupervised Microscop...
Surajit Das, Pavel Zun
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Overground gait transitions are not sharp but involve gradually changing walk-run mixtures even o...
Nicholas S. Baker, Leroy Long, Manoj Srinivasan
Replaced article(s) found for q-bio.CB. https://arxiv.org/list/q-bio.CB/new
[1/1]:
- Bistability of travelling waves and wave-pinning states in a mass-conserved reaction-diffusion sy...
Jack M. Hughes, Saar Modai, Leah Edelstein-Keshet, Arik Yochelis
Replaced article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- HelixVS: Deep Learning-Enhanced Structure-Based Platform for Screening and Design
Shanzhuo Zhang, Xianbin Ye, Donglong He, Yueyang Huang, Xiaonan Zhang, Xiaomin Fang
Crosslisted article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Human-AI Collaboration Increases Efficiency in Regulatory Writing
Eser, Gozin, Stallons, Caroline, Preusse, Rice, Wright, Robertson
Replaced article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- From Order to Chimeras: Unraveling Dynamic Patterns in Active Fluids with Nonlinear Growth
Joydeep Das, Abhishek Chaudhuri, Sudeshna Sinha
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Neuronal correlations shape the scaling behavior of memory capacity and nonlinear computational c...
Shotaro Takasu, Toshio Aoyagi
Replaced article(s) found for q-bio.PE. https://arxiv.org/list/q-bio.PE/new
[1/1]:
- Using machine learning to inform harvest control rule design in complex fishery settings
Felipe Montealegre-Mora, Carl Boettiger, Carl J. Walters, Christopher L. Cahill
Crosslisted article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- ECMSim: A high-performance web simulation of cardiac ECM remodeling through integrated ODE-based ...
Hasi Hays, William Richardson
Crosslisted article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- Physical Principles of Size and Frequency Scaling of Active Cytoskeletal Spirals
Aman Soni, Shivani A. Yadav, Chaitanya A. Athale
Crosslisted article(s) found for q-bio.CB. https://arxiv.org/list/q-bio.CB/new
[1/1]:
- ZapGPT: Free-form Language Prompting for Simulated Cellular Control
Nam H. Le, Patrick Erickson, Yanbo Zhang, Michael Levin, Josh Bongard
Crosslisted article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Scalable Modeling of Nonlinear Network Dynamics in Neurodegenerative Disease
Daniel Semchin, Emile d'Angremont, Marco Lorenzi, Boris Gutman
Crosslisted article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Physical Principles of Size and Frequency Scaling of Active Cytoskeletal Spirals
Aman Soni, Shivani A. Yadav, Chaitanya A. Athale
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Using machine learning to inform harvest control rule design in complex fishery settings
Felipe Montealegre-Mora, Carl Boettiger, Carl J. Walters, Christopher L. Cahill
Crosslisted article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- Knotted DNA Configurations in Bacteriophage Capsids: A Liquid Crystal Theory Approach
Pei Liu, Zhijie Wang, Tamara Christiani, Mariel Vazquez, M. Carme Calderer, Javier Arsuaga
Replaced article(s) found for q-bio.PE. https://arxiv.org/list/q-bio.PE/new
[1/1]:
- The structure of deviations from maximum parsimony for densely-sampled data and applications for ...
Howard-Snyder, Dumm, Barker, Milanov, Winston, Rich, Suchard, Matsen
Replaced article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Impact of Oxygen on DNA Damage Distribution in 3D Genome and Its Correlation to Oxygen Enhancemen...
Ankang Hu, Wanyi Zhou, Xiyu Luo, Rui Qiu, Junli Li
Crosslisted article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- HelixVS: Deep Learning Enhanced Structure-based Virtual Screening Platform for Hit Discovery
Shanzhuo Zhang, Xianbin Ye, Donglong He, Yueyang Huang, Xiaonan Zhang, Xiaomin Fang
Crosslisted article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Modelling of magnetic vortex microdisc dynamics under varying magnetic field in biological viscoe...
Andrea Vison\`a, Robert Morel, H\'el\`ene Joisten, Bernard Dieny, Ali…
Crosslisted article(s) found for q-bio.PE. https://arxiv.org/list/q-bio.PE/new
[1/1]:
- Bayesian tit-for-tat fosters cooperation in evolutionary stochastic games
Arunava Patra, Supratim Sengupta, Sagar Chakraborty
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Auditory steady-state response and gamma oscillations in an excitatory-inhibitory balanced neuron...
Duoyu Feng, Jiajia Li
Crosslisted article(s) found for q-bio.PE. https://arxiv.org/list/q-bio.PE/new
[1/1]:
- Composing $\alpha$-Gauss and logistic maps: Gradual and sudden transitions to chaos
Marcelo A. Pires, Constantino Tsallis, Evaldo M. F. Curado
Crosslisted article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Lost in the Middle: An Emergent Property from Information Retrieval Demands in LLMs
Nikolaus Salvatore, Hao Wang, Qiong Zhang
Replaced article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- RiboFlow: Conditional De Novo RNA Co-Design via Synergistic Flow Matching
Runze Ma, Zhongyue Zhang, Zichen Wang, Chenqing Hua, Jiahua Rao, Zhuomin Zhou, Shuangjia Zheng
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- The role of oscillations in grid cells' toroidal topology
Giovanni di Sarra, Siddharth Jha, Yasser Roudi
Crosslisted article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- A Hybrid Computational Intelligence Framework with Metaheuristic Optimization for Drug-Drug Inter...
Maryam Abdollahi Shamami, Babak Teimourpour, Farshad Sharifi
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Representation biases: will we achieve complete understanding by analyzing representations?
Andrew Kyle Lampinen, Stephanie C. Y. Chan, Yuxuan Li, Katherine Hermann
Replaced article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Strong anomalous diffusion for free-ranging birds
Ohad Vilk, Motti Charter, Sivan Toledo, Eli Barkai, Ran Nathan
Crosslisted article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Combined Representation and Generation with Diffusive State Predictive Information Bottleneck
Richard John, Yunrui Qiu, Lukas Herron, Pratyush Tiwary
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Cryo-em images are intrinsically low dimensional
Luke Evans, Octavian-Vlad Murad, Lars Dingeldein, Pilar Cossio, Roberto Covino, Marina Meila
[2025-09-17 Wed (UTC), 2 new articles found for q-bio.NC Neurons and Cognition]
toXiv_bot_toot
Replaced article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- Continuous body 3-D reconstruction of limbless animals
Qiyuan Fu, Thomas W. Mitchel, Jin Seob Kim, Gregory S. Chirikjian, Chen Li
[2025-09-18 Thu (UTC), 1 new article found for q-bio.BM Biomolecules]
toXiv_bot_toot
[2025-09-18 Thu (UTC), 4 new articles found for q-bio.NC Neurons and Cognition]
toXiv_bot_toot
Crosslisted article(s) found for physics.bio-ph. https://arxiv.org/list/physics.bio-ph/new
[1/1]:
- A mathematical theory for understanding when abstract representations emerge in neural networks
Bin Wang, W. Jeffrey Johnston, Stefano Fusi
[2025-09-17 Wed (UTC), 4 new articles found for q-bio.BM Biomolecules]
toXiv_bot_toot
[2025-09-17 Wed (UTC), 1 new article found for q-bio.QM Quantitative Methods]
toXiv_bot_toot
[2025-08-18 Mon (UTC), no new articles found for q-bio.BM Biomolecules]
toXiv_bot_toot
[2025-09-18 Thu (UTC), 1 new article found for q-bio.QM Quantitative Methods]
toXiv_bot_toot
[2025-08-18 Mon (UTC), 2 new articles found for physics.bio-ph Biological Physics]
toXiv_bot_toot
[2025-08-18 Mon (UTC), 2 new articles found for q-bio.QM Quantitative Methods]
toXiv_bot_toot
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Brain2Text Decoding Model Reveals the Neural Mechanisms of Visual Semantic Processing
Feihan Feng, Jingxin Nie
[2025-09-18 Thu (UTC), 2 new articles found for physics.bio-ph Biological Physics]
toXiv_bot_toot
[2025-09-17 Wed (UTC), no new articles found for physics.bio-ph Biological Physics]
toXiv_bot_toot
Replaced article(s) found for q-bio.NC. https://arxiv.org/list/q-bio.NC/new
[1/1]:
- Artificial Intelligence Software Structured to Simulate Human Working Memory, Mental Imagery, and...
Jared Edward Reser
Replaced article(s) found for q-bio.BM. https://arxiv.org/list/q-bio.BM/new
[1/1]:
- An Angle-Based Algorithmic Framework for the Interval Discretizable Distance Geometry Problem
da Rocha, Lavor, Liberti, de Melo Costa, Secchin, Malliavin
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- MorphGen: Controllable and Morphologically Plausible Generative Cell-Imaging
Berker Demirel, Marco Fumero, Theofanis Karaletsos, Francesco Locatello
Crosslisted article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Alignment conditions of the human eye for few-photon vision experiments
T. H. A. van der Reep, W. L\"offler
Replaced article(s) found for q-bio.QM. https://arxiv.org/list/q-bio.QM/new
[1/1]:
- Quantitative evaluation of methods to analyze motion changes in single-particle experiments
Gil, et al.